Urban activities currently consume 75% of global final energy demand, which is expected to increase given absolute and relative population growth in cities. Assessments of both producer (upstream) and consumer (downstream) ecological and socioeconomic impacts of urban inter-industry exchanges are needed to reduce energy consumption and resource use behind the industrial footprints of cities. Environmental extensions in the input-output analysis are designed from the user side perspective, focusing only on commercial energy supply and use. This study introduced emergy-evaluated supply-extended and use-extended carbon footprint models for Vienna and compared their empirical and conceptual implications. Emergy-evaluated footprints of Vienna's urban consumption were estimated by combining industrial and systems ecology approaches as per the research question, based on previous investigations of GHG emissions and energy supply- and use-extensions. Results showed that the ranking of footprints of final product categories is sensitive to the evaluation method, with products of extractive and manufacturing industries differing by more than 10% depending on whether emergy or carbon evaluation is chosen. The emergy-based comparison further reveals that for products of extractive industries, the difference between use and supply extension results can be more than 20% as opposed to carbon-based comparison with the difference between supply and use extension results for services not even amounting to 5%. Future studies could address the over-estimation of direct energy supply to the economy, under-estimation of product and service, inconsistency in standard use-extension design, and challenges in assembling emergy-evaluated supply and use extensions. Fundings are relevant for unified responsibility assessment of upstream and downstream sectors without prioritizing structural features.